Quick Start#
Get started with BDP in just a few minutes.
Prerequisites#
- BDP CLI installed (see Installation)
- Basic familiarity with command-line tools
Step 1: Initialize a Project#
Create a new BDP project:
bash
bdp init --name my-projectThis creates:
bdp.yml- Project configurationbdp.lock- Lockfile for reproducibility.bdp/- Local data directory
Step 2: Add a Data Source#
Add a UniProt protein sequence:
bash
bdp source add uniprot:P01308-fasta@1.0This adds human insulin (P01308) in FASTA format at version 1.1.0.
Step 3: Pull Data#
Download the data:
bash
bdp pullBDP will download and verify the data, storing it in .bdp/ directory.
Step 4: Verify#
Check your project status:
bash
bdp statusCommon Commands#
List sources
bash
bdp source listRemove a source
bash
bdp source remove uniprot:P01308-fasta@1.0View audit trail
bash
bdp auditGet help
bash
bdp --helpbdp source --helpNext Steps#
- Best Practices - Learn about Git integration and workflows
- Introduction - Understand the reproducibility benefits
- Visit Codeberg Issues for community support